Gene description for PDCD6IP
Gene name programmed cell death 6 interacting protein
Gene symbol PDCD6IP
Other names/aliases AIP1
ALIX
DRIP4
HP95
MCPH29
Species Homo sapiens
 Experiment description of studies that identified PDCD6IP in Lymphoma cells

1
Experiment ID3166
Identified moleculeprotein
Extracellular vesicle typeExtracellular vesicles
MISEVSmall EVs
Identification method Western blotting
PubMed ID 34743199   
OrganismHomo sapiens
Experiment descriptionCD20 expression, TrkB activation and functional activity of diffuse large B cell lymphoma-derived small extracellular vesicles
AuthorsAitamer M, Akil H, Vignoles C, Branchaud M, Abraham J, Gachard N, Feuillard J, Jauberteau MO, Shirvani H, Troutaud D, Bentayeb H.
Journal name Br J Cancer
Publication year2021
SampleLymphoma cells
Sample nameSUDHL6 (GCB) - 48 h
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

2
Experiment ID3167
Identified moleculeprotein
Extracellular vesicle typeExtracellular vesicles
MISEVSmall EVs
Identification method Western blotting
PubMed ID 34743199   
OrganismHomo sapiens
Experiment descriptionCD20 expression, TrkB activation and functional activity of diffuse large B cell lymphoma-derived small extracellular vesicles
AuthorsAitamer M, Akil H, Vignoles C, Branchaud M, Abraham J, Gachard N, Feuillard J, Jauberteau MO, Shirvani H, Troutaud D, Bentayeb H.
Journal name Br J Cancer
Publication year2021
SampleLymphoma cells
Sample nameSUDHL4 (GCB) - 48 h
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

3
Experiment ID3168
Identified moleculeprotein
Extracellular vesicle typeExtracellular vesicles
MISEVSmall EVs
Identification method Western blotting
PubMed ID 34743199   
OrganismHomo sapiens
Experiment descriptionCD20 expression, TrkB activation and functional activity of diffuse large B cell lymphoma-derived small extracellular vesicles
AuthorsAitamer M, Akil H, Vignoles C, Branchaud M, Abraham J, Gachard N, Feuillard J, Jauberteau MO, Shirvani H, Troutaud D, Bentayeb H.
Journal name Br J Cancer
Publication year2021
SampleLymphoma cells
Sample nameOCI-LY3 (ABC) - 48 h
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

4
Experiment ID3169
Identified moleculeprotein
Extracellular vesicle typeExtracellular vesicles
MISEVSmall EVs
Identification method Western blotting
PubMed ID 34743199   
OrganismHomo sapiens
Experiment descriptionCD20 expression, TrkB activation and functional activity of diffuse large B cell lymphoma-derived small extracellular vesicles
AuthorsAitamer M, Akil H, Vignoles C, Branchaud M, Abraham J, Gachard N, Feuillard J, Jauberteau MO, Shirvani H, Troutaud D, Bentayeb H.
Journal name Br J Cancer
Publication year2021
SampleLymphoma cells
Sample nameOCI-LY10 (ABC) - 48 h
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

5
Experiment ID3170
Identified moleculeprotein
Extracellular vesicle typeExtracellular vesicles
MISEVSmall EVs
Identification method Western blotting
PubMed ID 34743199   
OrganismHomo sapiens
Experiment descriptionCD20 expression, TrkB activation and functional activity of diffuse large B cell lymphoma-derived small extracellular vesicles
AuthorsAitamer M, Akil H, Vignoles C, Branchaud M, Abraham J, Gachard N, Feuillard J, Jauberteau MO, Shirvani H, Troutaud D, Bentayeb H.
Journal name Br J Cancer
Publication year2021
SampleLymphoma cells
Sample nameU2932 (ABC) - 48 h
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
Methods used in the studyWestern blotting
EV-TRACK -

6
Experiment ID1669
Identified moleculeProtein
Extracellular vesicle typeExosomes
MISEVSmall EVs
Identification method Mass spectrometry
PubMed ID 34108659   
OrganismHomo sapiens
Experiment descriptionQuantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
AuthorsKugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R.
Journal name Nat Cell Biol
Publication year2021
SampleLymphoma cells
Sample nameRaji
Isolation/purification methodsDifferential centrifugation
Filtration
Ultracentrifugation
Flotation density-
Molecules identified in the studyProtein
mRNA
Methods used in the studyRT-qPCR
Western blotting
Mass spectrometry
Flow cytometry
EV-TRACK -

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